A school, or a company whose business is closely tied to the academic calendar for some reason, such as having maintenance contracts on school grounds, or depending on the supply of student labor (such as an amusement park that hires students as cheap labor, or a restaurant near a university that hires students as servers while they are living on campus), or that primarily serves students as customers, might say something like
Our business hours are 9-10 when school is in session and 9-8 when it is not.
or
We are now hiring staff for the 2025-2026 school term. (You can also refer to the fall term and the spring term for institutions that divide their academic calendar that way, "winter" and "summer" are also used the same way in some schools.)
Your original example:
We take projects throughout the school year
actually sounds quite natural to me as well, depending on context. (For example, facilities at a children's summer camp may be available to rent for private events during the school year.)